Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.36□□□□□ -0.11
PDE6DO43924 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.36□□□□□ -0.11
PDE6DO43924 MTMR9LP-203ENST00000426597 1545 ntBASIC14.36□□□□□ -0.11
PDE6DO43924 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 AL390719.1-204ENST00000412397 1219 ntBASIC14.36□□□□□ -0.11
PDE6DO43924 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.36□□□□□ -0.11
PDE6DO43924 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.36□□□□□ -0.11
PDE6DO43924 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 AL031432.3-201ENST00000607698 485 ntBASIC14.36□□□□□ -0.11
PDE6DO43924 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.36□□□□□ -0.11
PDE6DO43924 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.36□□□□□ -0.11
PDE6DO43924 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
PDE6DO43924 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.36□□□□□ -0.11
PDE6DO43924 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDE6DO43924 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
PDE6DO43924 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.35□□□□□ -0.11
PDE6DO43924 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 AL118508.1-201ENST00000613502 2345 ntBASIC14.35□□□□□ -0.11
PDE6DO43924 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PDE6DO43924 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.35□□□□□ -0.11
PDE6DO43924 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PDE6DO43924 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.35□□□□□ -0.11
PDE6DO43924 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.35□□□□□ -0.11
PDE6DO43924 PKD1P5-201ENST00000532415 10291 ntBASIC14.35□□□□□ -0.11
PDE6DO43924 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDE6DO43924 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PDE6DO43924 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.35□□□□□ -0.11
PDE6DO43924 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PDE6DO43924 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PDE6DO43924 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PDE6DO43924 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
PDE6DO43924 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDE6DO43924 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
PDE6DO43924 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 AC011676.5-201ENST00000624864 2660 ntBASIC14.34□□□□□ -0.11
PDE6DO43924 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
PDE6DO43924 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDE6DO43924 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PDE6DO43924 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.34□□□□□ -0.11
PDE6DO43924 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms