Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC112907.2-201ENST00000448639 330 ntBASIC14.61□□□□□ -0.07
LINC01548A6NM66 HOMER2P1-201ENST00000455653 964 ntBASIC14.61□□□□□ -0.07
LINC01548A6NM66 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 AC010240.3-201ENST00000607688 395 ntBASIC14.61□□□□□ -0.07
LINC01548A6NM66 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01548A6NM66 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01548A6NM66 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.6□□□□□ -0.07
LINC01548A6NM66 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 MIR3917-201ENST00000580971 93 ntBASIC14.6□□□□□ -0.07
LINC01548A6NM66 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 HYMAI.1-201ENST00000620949 238 ntBASIC14.6□□□□□ -0.07
LINC01548A6NM66 AC079602.3-201ENST00000623931 403 ntBASIC14.6□□□□□ -0.07
LINC01548A6NM66 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01548A6NM66 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01548A6NM66 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 AL031133.1-201ENST00000406807 723 ntBASIC14.59□□□□□ -0.07
LINC01548A6NM66 KRT18P41-201ENST00000518924 1277 ntBASIC14.59□□□□□ -0.07
LINC01548A6NM66 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 AC087388.1-201ENST00000571370 1112 ntBASIC14.59□□□□□ -0.07
LINC01548A6NM66 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 MYC-208ENST00000641036 567 ntBASIC14.59□□□□□ -0.07
LINC01548A6NM66 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
LINC01548A6NM66 MYLKP1-201ENST00000509077 1580 ntBASIC14.59□□□□□ -0.07
LINC01548A6NM66 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01548A6NM66 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.58□□□□□ -0.07
LINC01548A6NM66 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
LINC01548A6NM66 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01548A6NM66 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01548A6NM66 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01548A6NM66 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01548A6NM66 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.58□□□□□ -0.07
LINC01548A6NM66 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01548A6NM66 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01548A6NM66 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms