Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 AL121906.2-201ENST00000621597 723 ntBASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 KRT8P45-201ENST00000414328 1447 ntBASIC13.18□□□□□ -0.3
LINC01549A6NIU2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC01549A6NIU2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TUBB8P6-201ENST00000436895 1288 ntBASIC13.17□□□□□ -0.3
LINC01549A6NIU2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC01549A6NIU2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.16□□□□□ -0.3
LINC01549A6NIU2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.16□□□□□ -0.3
LINC01549A6NIU2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms