Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LCE6AA0A183 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LCE6AA0A183 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LCE6AA0A183 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LCE6AA0A183 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LCE6AA0A183 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.65□□□□□ -0.38
LCE6AA0A183 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.65□□□□□ -0.38
LCE6AA0A183 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.65□□□□□ -0.38
LCE6AA0A183 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.65□□□□□ -0.38
LCE6AA0A183 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.65□□□□□ -0.38
LCE6AA0A183 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LCE6AA0A183 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LCE6AA0A183 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LCE6AA0A183 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 SMG8-203ENST00000578922 2178 ntBASIC12.64□□□□□ -0.39
LCE6AA0A183 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 MCCD1P2-201ENST00000423228 335 ntBASIC12.64□□□□□ -0.39
LCE6AA0A183 CNN2P11-201ENST00000429351 262 ntBASIC12.64□□□□□ -0.39
LCE6AA0A183 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.64□□□□□ -0.39
LCE6AA0A183 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 MIR4469-201ENST00000583919 79 ntBASIC12.64□□□□□ -0.39
LCE6AA0A183 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.64□□□□□ -0.39
LCE6AA0A183 AL096865.1-201ENST00000606796 927 ntBASIC12.64□□□□□ -0.39
LCE6AA0A183 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
LCE6AA0A183 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LCE6AA0A183 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.64□□□□□ -0.39
LCE6AA0A183 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.63□□□□□ -0.39
LCE6AA0A183 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.63□□□□□ -0.39
LCE6AA0A183 BCRP1-201ENST00000444246 691 ntBASIC12.63□□□□□ -0.39
LCE6AA0A183 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AC105339.3-201ENST00000560043 636 ntBASIC12.63□□□□□ -0.39
LCE6AA0A183 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.63□□□□□ -0.39
LCE6AA0A183 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.63□□□□□ -0.39
LCE6AA0A183 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.63□□□□□ -0.39
LCE6AA0A183 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.63□□□□□ -0.39
LCE6AA0A183 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC12.63□□□□□ -0.39
LCE6AA0A183 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 TP73-AS1-210ENST00000637775 1455 ntBASIC12.63□□□□□ -0.39
LCE6AA0A183 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LCE6AA0A183 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LCE6AA0A183 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.62□□□□□ -0.39
LCE6AA0A183 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LCE6AA0A183 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.62□□□□□ -0.39
LCE6AA0A183 AC007225.1-201ENST00000566331 1836 ntBASIC12.62□□□□□ -0.39
LCE6AA0A183 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LCE6AA0A183 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LCE6AA0A183 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LCE6AA0A183 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LCE6AA0A183 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LCE6AA0A183 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC12.62□□□□□ -0.39
LCE6AA0A183 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.62□□□□□ -0.39
LCE6AA0A183 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LCE6AA0A183 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms