Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 FSCN1P1-201ENST00000568912 1481 ntBASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-3A0A0A0MS03 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 SDHAP2-201ENST00000455183 2001 ntBASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 RPPH1-201ENST00000516869 333 ntBASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC020763.4-201ENST00000623414 4170 ntBASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV5-3A0A0A0MS03 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 AC006116.8-202ENST00000587620 1550 ntBASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV5-3A0A0A0MS03 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV5-3A0A0A0MS03 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV5-3A0A0A0MS03 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV5-3A0A0A0MS03 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms