Protein–RNA interactions for Protein: Q9Y6W3

CAPN7, Calpain-7, humanhuman

Predictions only

Length 813 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7Q9Y6W3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SDHAP1-207ENST00000440850 2000 ntBASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAPN7Q9Y6W3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 TFP1-202ENST00000475455 1573 ntBASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAPN7Q9Y6W3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAPN7Q9Y6W3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.58■□□□□ 0.56
CAPN7Q9Y6W3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 AL356309.3-201ENST00000624132 1934 ntBASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 AC104417.2-201ENST00000562989 1793 ntBASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN7Q9Y6W3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms