Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 CROCCP3-202ENST00000420820 1947 ntBASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
SNX9Q9Y5X1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 LINC01311-201ENST00000565162 1445 ntBASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 AC093525.10-201ENST00000625130 1569 ntBASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX9Q9Y5X1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 AP000593.1-201ENST00000393668 712 ntBASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 AC083849.1-201ENST00000615227 514 ntBASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 AC099343.3-201ENST00000605834 2503 ntBASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX9Q9Y5X1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AL031598.1-201ENST00000561511 1773 ntBASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 MIR3180-4-201ENST00000582223 153 ntBASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AC079602.3-201ENST00000623931 403 ntBASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX9Q9Y5X1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 AC112777.1-201ENST00000540175 1423 ntBASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 HBZP1-201ENST00000354915 429 ntBASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms