Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 SDHAP1-207ENST00000440850 2000 ntBASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 DUX4L19-201ENST00000557448 1267 ntBASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 TSPY26P-202ENST00000565928 3884 ntBASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAPPC1Q9Y5R8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 CDV3P1-201ENST00000471403 739 ntBASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AC138907.5-202ENST00000569484 235 ntBASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAPPC1Q9Y5R8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms