Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 MTMR9LP-203ENST00000426597 1545 ntBASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 AC020916.1-201ENST00000587762 1774 ntBASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 AC009947.2-201ENST00000444014 672 ntBASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 TNXA-203ENST00000507684 2038 ntBASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.11■□□□□ 0.33
HRH3Q9Y5N1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC005332.8-201ENST00000622750 2735 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 KRT18P38-201ENST00000449496 1282 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC092647.4-201ENST00000457211 535 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC140113.3-201ENST00000605663 199 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.1■□□□□ 0.33
HRH3Q9Y5N1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 MCCD1P1-208ENST00000445732 328 ntBASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 AL359075.1-203ENST00000462729 1002 ntBASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 AL031432.5-201ENST00000641059 760 ntBASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HRH3Q9Y5N1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms