Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 FAM210CP-201ENST00000445714 574 ntBASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 AC091390.4-202ENST00000476426 537 ntBASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 AC011298.2-201ENST00000617989 482 ntBASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 KRT8P11-201ENST00000409686 1436 ntBASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGB3Q9Y5G1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 AC130371.2-201ENST00000619443 611 ntBASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGB3Q9Y5G1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 FAM207BP-201ENST00000447172 505 ntBASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 RBM17P1-201ENST00000453646 1190 ntBASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 TSPY15P-201ENST00000457163 923 ntBASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 MIR6786-201ENST00000616843 113 ntBASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGB3Q9Y5G1 AC133561.5-201ENST00000635547 218 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms