Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 SDHAP1-207ENST00000440850 2000 ntBASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 AC131212.4-201ENST00000623606 975 ntBASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 HLA-A-209ENST00000638375 975 ntBASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 TEX21P-204ENST00000641479 1693 ntBASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HHLA3Q9XRX5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 AL158047.1-201ENST00000445918 881 ntBASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HHLA3Q9XRX5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AL135905.2-201ENST00000584934 1404 ntBASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms