Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 AL135905.2-201ENST00000584934 1404 ntBASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 MYLKP1-201ENST00000509077 1580 ntBASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL4Q9UJQ4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 AC004951.3-201ENST00000418645 1148 ntBASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 CKBP1-201ENST00000565489 1086 ntBASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 MYC-208ENST00000641036 567 ntBASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.72■□□□□ 0.75
SALL4Q9UJQ4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 AC008622.2-201ENST00000617006 1229 ntBASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 AC099343.3-201ENST00000605834 2503 ntBASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 KRT17P2-201ENST00000300992 1314 ntBASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL4Q9UJQ4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 AC011506.1-201ENST00000474329 610 ntBASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL4Q9UJQ4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms