Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.8□□□□□ -0.36
CDC42SE2Q9NRR3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 AC008556.1-201ENST00000610908 2040 ntBASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 GNAS-203ENST00000306120 1878 ntBASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 MYLKP1-201ENST00000509077 1580 ntBASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 AC239809.2-201ENST00000415381 517 ntBASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 AC004980.1-204ENST00000429707 299 ntBASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CDC42SE2Q9NRR3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 AC026366.1-201ENST00000488803 879 ntBASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 HTR7P1-201ENST00000538670 1336 ntBASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 AC134043.2-201ENST00000624206 2238 ntBASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms