Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 AP001412.1-201ENST00000608405 714 ntBASIC16.77■□□□□ 0.28
HINT3Q9NQE9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HINT3Q9NQE9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HINT3Q9NQE9 AC090340.1-201ENST00000620778 4980 ntBASIC16.77■□□□□ 0.27
HINT3Q9NQE9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.77■□□□□ 0.27
HINT3Q9NQE9 ESPNP-201ENST00000270691 2015 ntBASIC16.77■□□□□ 0.27
HINT3Q9NQE9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HINT3Q9NQE9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
HINT3Q9NQE9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HINT3Q9NQE9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 AC093677.2-201ENST00000600169 1863 ntBASIC16.76■□□□□ 0.27
HINT3Q9NQE9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 AC012618.2-201ENST00000428058 849 ntBASIC16.76■□□□□ 0.27
HINT3Q9NQE9 PRSS44-201ENST00000515154 1146 ntBASIC16.76■□□□□ 0.27
HINT3Q9NQE9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 Z99916.2-201ENST00000604037 246 ntBASIC16.76■□□□□ 0.27
HINT3Q9NQE9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 FZD10-202ENST00000539839 3282 ntBASIC16.76■□□□□ 0.27
HINT3Q9NQE9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.76■□□□□ 0.27
HINT3Q9NQE9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 RPS2P55-201ENST00000397318 883 ntBASIC16.75■□□□□ 0.27
HINT3Q9NQE9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 AC107956.1-201ENST00000494359 873 ntBASIC16.75■□□□□ 0.27
HINT3Q9NQE9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 AL445675.2-201ENST00000620291 557 ntBASIC16.75■□□□□ 0.27
HINT3Q9NQE9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms