Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MKKSQ9NPJ1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MKKSQ9NPJ1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MKKSQ9NPJ1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 KRT18P38-201ENST00000449496 1282 ntBASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AL020996.1-203ENST00000536896 2307 ntBASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AC004408.2-201ENST00000623613 2777 ntBASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MKKSQ9NPJ1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 AL049812.1-201ENST00000432563 2267 ntBASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 AC112907.2-201ENST00000448639 330 ntBASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 RASA4DP-201ENST00000460726 1199 ntBASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 AC104390.1-201ENST00000555663 520 ntBASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 AL121956.5-201ENST00000625261 221 ntBASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.54■□□□□ 0.4
MKKSQ9NPJ1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 SPDYE15P-201ENST00000424157 909 ntBASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 Z98044.1-201ENST00000632503 1764 ntBASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MKKSQ9NPJ1 AC006333.2-201ENST00000607957 2099 ntBASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MKKSQ9NPJ1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms