Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRF2Q9HAW0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BRF2Q9HAW0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.74■□□□□ 0.43
BRF2Q9HAW0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BRF2Q9HAW0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.74■□□□□ 0.43
BRF2Q9HAW0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BRF2Q9HAW0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 MIR1238-201ENST00000408483 83 ntBASIC17.73■□□□□ 0.43
BRF2Q9HAW0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 AL355075.4-201ENST00000554988 638 ntBASIC17.73■□□□□ 0.43
BRF2Q9HAW0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BRF2Q9HAW0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 AC093677.2-201ENST00000600169 1863 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 AL390955.1-201ENST00000428694 934 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 MIR4497-201ENST00000583208 89 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 AC010653.2-201ENST00000623505 997 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 HCG11-201ENST00000411553 5696 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 AC135776.1-201ENST00000319817 2481 ntBASIC17.72■□□□□ 0.43
BRF2Q9HAW0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
BRF2Q9HAW0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 TSPY14P-201ENST00000303979 915 ntBASIC17.71■□□□□ 0.43
BRF2Q9HAW0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 AC007663.1-201ENST00000438948 1240 ntBASIC17.71■□□□□ 0.43
BRF2Q9HAW0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 CR769767.2-201ENST00000622735 460 ntBASIC17.71■□□□□ 0.43
BRF2Q9HAW0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
BRF2Q9HAW0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
BRF2Q9HAW0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
BRF2Q9HAW0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms