Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN3Q9H347 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 AC010331.1-201ENST00000611423 582 ntBASIC17.19■□□□□ 0.34
UBQLN3Q9H347 AC006011.2-201ENST00000621313 1158 ntBASIC17.19■□□□□ 0.34
UBQLN3Q9H347 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN3Q9H347 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 BX664615.1-201ENST00000443558 458 ntBASIC17.18■□□□□ 0.34
UBQLN3Q9H347 MIR4674-201ENST00000582457 87 ntBASIC17.18■□□□□ 0.34
UBQLN3Q9H347 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 KRT8P3-201ENST00000519669 1449 ntBASIC17.18■□□□□ 0.34
UBQLN3Q9H347 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN3Q9H347 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC104076.2-201ENST00000448912 469 ntBASIC17.17■□□□□ 0.34
UBQLN3Q9H347 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC008622.2-201ENST00000617006 1229 ntBASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 AC026471.1-201ENST00000564629 3026 ntBASIC17.17■□□□□ 0.34
UBQLN3Q9H347 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
UBQLN3Q9H347 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms