Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AC007952.6-201ENST00000573168 2673 ntBASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AC003957.1-201ENST00000625108 2673 ntBASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 PHGDH-210ENST00000641115 1638 ntBASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CNTNAP3Q9BZ76 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 GPR32P1-201ENST00000601788 811 ntBASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNTNAP3Q9BZ76 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 KRT18P23-201ENST00000435622 1283 ntBASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 AC096582.2-201ENST00000510860 516 ntBASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 AC012640.2-201ENST00000561606 901 ntBASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 AC093028.1-201ENST00000622998 982 ntBASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CNTNAP3Q9BZ76 FEM1AP1-201ENST00000431297 1995 ntBASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.6■□□□□ 0.41
CNTNAP3Q9BZ76 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms