Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 KRT8P8-201ENST00000434750 1448 ntBASIC14.02□□□□□ -0.16
SSBP4Q9BWG4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 STK33P1-201ENST00000423835 1218 ntBASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 AC006015.1-201ENST00000429970 570 ntBASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 AC083906.6-201ENST00000641366 219 ntBASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 NFIC-211ENST00000641145 8399 ntBASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP4Q9BWG4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 AC016769.1-201ENST00000409132 1010 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 LSM12P1-201ENST00000411836 588 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 AL390719.1-204ENST00000412397 1219 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 AC007322.1-201ENST00000426983 750 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 AL645608.8-201ENST00000606034 2086 ntBASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP4Q9BWG4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 OR6D1P-203ENST00000641209 4860 ntBASIC14□□□□□ -0.17
SSBP4Q9BWG4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 AC005829.2-201ENST00000571422 1056 ntBASIC14□□□□□ -0.17
SSBP4Q9BWG4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14□□□□□ -0.17
SSBP4Q9BWG4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP4Q9BWG4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms