Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
LRRC58Q96CX6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.66■□□□□ 0.42
LRRC58Q96CX6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRRC58Q96CX6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.65■□□□□ 0.42
LRRC58Q96CX6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.64■□□□□ 0.42
LRRC58Q96CX6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC58Q96CX6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.64■□□□□ 0.42
LRRC58Q96CX6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRC58Q96CX6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 FLJ13224-201ENST00000313737 1514 ntBASIC17.64■□□□□ 0.41
LRRC58Q96CX6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRC58Q96CX6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC58Q96CX6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms