Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS33AQ96AX1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VPS33AQ96AX1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 AL023875.1-201ENST00000640777 796 ntBASIC17.83■□□□□ 0.44
VPS33AQ96AX1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS33AQ96AX1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AL355802.2-201ENST00000402069 882 ntBASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AC090192.1-201ENST00000517740 490 ntBASIC17.82■□□□□ 0.44
VPS33AQ96AX1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VPS33AQ96AX1 AP003097.1-201ENST00000530657 1135 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms