Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 FAM207BP-201ENST00000447172 505 ntBASIC20.92■□□□□ 0.94
SMARCE1Q969G3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 AC073195.1-201ENST00000607241 877 ntBASIC20.92■□□□□ 0.94
SMARCE1Q969G3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 RCC2P3-201ENST00000418112 1537 ntBASIC20.92■□□□□ 0.94
SMARCE1Q969G3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMARCE1Q969G3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 OR6D1P-202ENST00000641007 5290 ntBASIC20.91■□□□□ 0.94
SMARCE1Q969G3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 KRT8P45-201ENST00000414328 1447 ntBASIC20.91■□□□□ 0.94
SMARCE1Q969G3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 RARRES2P10-201ENST00000564312 460 ntBASIC20.91■□□□□ 0.94
SMARCE1Q969G3 AC020916.1-201ENST00000587762 1774 ntBASIC20.91■□□□□ 0.94
SMARCE1Q969G3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 AC130371.2-201ENST00000619443 611 ntBASIC20.91■□□□□ 0.94
SMARCE1Q969G3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMARCE1Q969G3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 NOC2LP2-201ENST00000407594 1944 ntBASIC20.9■□□□□ 0.94
SMARCE1Q969G3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 AC011506.1-201ENST00000474329 610 ntBASIC20.9■□□□□ 0.94
SMARCE1Q969G3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SMARCE1Q969G3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMARCE1Q969G3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 MIR6786-201ENST00000616843 113 ntBASIC20.89■□□□□ 0.93
SMARCE1Q969G3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMARCE1Q969G3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms