Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF248Q8NDW4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 KRT18P13-201ENST00000400056 1290 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 PMS2P1-201ENST00000431037 1228 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 MCCD1P1-208ENST00000445732 328 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 MIR3917-201ENST00000580971 93 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 AC090616.6-201ENST00000582640 721 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 AL353801.3-201ENST00000609898 542 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 AC112497.1-201ENST00000624824 639 ntBASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.71■□□□□ 0.43
ZNF248Q8NDW4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF248Q8NDW4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ZNF248Q8NDW4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
ZNF248Q8NDW4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 AL023284.2-201ENST00000405850 579 ntBASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 AC138894.3-201ENST00000603787 634 ntBASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF248Q8NDW4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AC125437.2-201ENST00000625180 2167 ntBASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ZNF248Q8NDW4 AL590627.1-203ENST00000421194 1026 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms