Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TMEM35AQ53FP2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 AL163051.1-201ENST00000569214 1512 ntBASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TMEM35AQ53FP2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 AC009113.1-201ENST00000570267 2443 ntBASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM35AQ53FP2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 MIR149-201ENST00000384879 89 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 LIN28AP1-201ENST00000429574 405 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 AC005363.2-201ENST00000618631 242 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 AL138966.2-201ENST00000621997 464 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 AL162741.1-201ENST00000565563 1558 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 BCL2-203ENST00000589955 5011 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 HCG11-201ENST00000411553 5696 ntBASIC17.6■□□□□ 0.41
TMEM35AQ53FP2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM35AQ53FP2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms