Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RSPO1Q2MKA7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 AC128688.1-201ENST00000487626 519 ntBASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.05■□□□□ 0.16
RSPO1Q2MKA7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 AC104390.1-201ENST00000555663 520 ntBASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RSPO1Q2MKA7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 LINC01568-207ENST00000641790 1380 ntBASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 AC087499.1-201ENST00000418141 1075 ntBASIC16.03■□□□□ 0.16
RSPO1Q2MKA7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms