Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.45□□□□□ -0.58
HSPG2P98160 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HSPG2P98160 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.45□□□□□ -0.58
HSPG2P98160 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.45□□□□□ -0.58
HSPG2P98160 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC11.45□□□□□ -0.58
HSPG2P98160 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 AC093512.1-201ENST00000617969 520 ntBASIC11.45□□□□□ -0.58
HSPG2P98160 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.45□□□□□ -0.58
HSPG2P98160 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HSPG2P98160 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HSPG2P98160 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.45□□□□□ -0.58
HSPG2P98160 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 AC087641.1-201ENST00000557561 1021 ntBASIC11.45□□□□□ -0.58
HSPG2P98160 OR7E47P-204ENST00000575924 449 ntBASIC11.45□□□□□ -0.58
HSPG2P98160 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.45□□□□□ -0.58
HSPG2P98160 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 AL357033.4-201ENST00000617703 1807 ntBASIC11.45□□□□□ -0.58
HSPG2P98160 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HSPG2P98160 AC004817.3-201ENST00000602957 2129 ntBASIC11.45□□□□□ -0.58
HSPG2P98160 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HSPG2P98160 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HSPG2P98160 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.44□□□□□ -0.58
HSPG2P98160 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.44□□□□□ -0.58
HSPG2P98160 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.44□□□□□ -0.58
HSPG2P98160 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 GAPDHP21-201ENST00000450301 1010 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 NKAPP1-205ENST00000585790 367 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 AC008735.5-201ENST00000623544 497 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HSPG2P98160 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 AC006333.2-201ENST00000607957 2099 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HSPG2P98160 MKNK2P1-201ENST00000437526 628 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.44□□□□□ -0.58
HSPG2P98160 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HSPG2P98160 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 AP002414.3-201ENST00000589352 1468 ntBASIC11.44□□□□□ -0.58
HSPG2P98160 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.44□□□□□ -0.58
HSPG2P98160 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.44□□□□□ -0.58
HSPG2P98160 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.44□□□□□ -0.58
HSPG2P98160 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HSPG2P98160 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.43□□□□□ -0.58
HSPG2P98160 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 AC105339.3-201ENST00000560043 636 ntBASIC11.43□□□□□ -0.58
HSPG2P98160 AC005829.1-201ENST00000570002 483 ntBASIC11.43□□□□□ -0.58
HSPG2P98160 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
HSPG2P98160 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC11.43□□□□□ -0.58
HSPG2P98160 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HSPG2P98160 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.43□□□□□ -0.58
HSPG2P98160 PRSS29P-201ENST00000440800 595 ntBASIC11.43□□□□□ -0.58
HSPG2P98160 AC109322.1-201ENST00000524499 1264 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms