Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 AC239809.2-201ENST00000415381 517 ntBASIC17.12■□□□□ 0.33
SMIM11AP58511 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.12■□□□□ 0.33
SMIM11AP58511 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.12■□□□□ 0.33
SMIM11AP58511 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMIM11AP58511 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMIM11AP58511 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMIM11AP58511 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SMIM11AP58511 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 KRASP1-201ENST00000407852 552 ntBASIC17.11■□□□□ 0.33
SMIM11AP58511 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.11■□□□□ 0.33
SMIM11AP58511 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 GNAS-203ENST00000306120 1878 ntBASIC17.11■□□□□ 0.33
SMIM11AP58511 AC093677.2-201ENST00000600169 1863 ntBASIC17.11■□□□□ 0.33
SMIM11AP58511 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMIM11AP58511 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM11AP58511 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SMIM11AP58511 MYLKP1-201ENST00000509077 1580 ntBASIC17.11■□□□□ 0.33
SMIM11AP58511 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMIM11AP58511 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM11AP58511 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.1■□□□□ 0.33
SMIM11AP58511 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.1■□□□□ 0.33
SMIM11AP58511 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SMIM11AP58511 HTR7P1-201ENST00000538670 1336 ntBASIC17.1■□□□□ 0.33
SMIM11AP58511 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM11AP58511 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM11AP58511 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM11AP58511 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM11AP58511 AC008556.1-201ENST00000610908 2040 ntBASIC17.09■□□□□ 0.33
SMIM11AP58511 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM11AP58511 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM11AP58511 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms