Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.66□□□□□ -0.06
CDC34P49427 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC34P49427 AC005829.2-201ENST00000571422 1056 ntBASIC14.66□□□□□ -0.06
CDC34P49427 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC34P49427 RAP2CP1-201ENST00000605103 478 ntBASIC14.66□□□□□ -0.06
CDC34P49427 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC34P49427 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC34P49427 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC34P49427 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC34P49427 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 AC093677.2-201ENST00000600169 1863 ntBASIC14.65□□□□□ -0.06
CDC34P49427 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDC34P49427 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDC34P49427 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 RPS2P52-201ENST00000469610 820 ntBASIC14.65□□□□□ -0.06
CDC34P49427 KRT18P16-201ENST00000510337 1294 ntBASIC14.65□□□□□ -0.06
CDC34P49427 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.65□□□□□ -0.06
CDC34P49427 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC34P49427 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC34P49427 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC34P49427 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
CDC34P49427 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.65□□□□□ -0.07
CDC34P49427 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC34P49427 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC34P49427 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.64□□□□□ -0.07
CDC34P49427 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDC34P49427 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.64□□□□□ -0.07
CDC34P49427 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC34P49427 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms