Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CLCN1P35523 AC103702.1-201ENST00000548801 2630 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCN1P35523 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 FLJ38576-201ENST00000623820 2459 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 IRX1P1-201ENST00000438849 1838 ntBASIC21.11■□□□□ 0.97
CLCN1P35523 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCN1P35523 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 PP12613-201ENST00000424958 2230 ntBASIC21.1■□□□□ 0.97
CLCN1P35523 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.1■□□□□ 0.97
CLCN1P35523 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.1■□□□□ 0.97
CLCN1P35523 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 AC124283.5-201ENST00000624661 1809 ntBASIC21.1■□□□□ 0.97
CLCN1P35523 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCN1P35523 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 AC092368.3-202ENST00000574180 1591 ntBASIC21.1■□□□□ 0.97
CLCN1P35523 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCN1P35523 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.1■□□□□ 0.97
CLCN1P35523 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.09■□□□□ 0.97
CLCN1P35523 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLCN1P35523 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.09■□□□□ 0.97
CLCN1P35523 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.09■□□□□ 0.97
CLCN1P35523 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 AC060766.5-201ENST00000590539 871 ntBASIC21.09■□□□□ 0.97
CLCN1P35523 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLCN1P35523 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCN1P35523 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.09■□□□□ 0.97
CLCN1P35523 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCN1P35523 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCN1P35523 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CLCN1P35523 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.08■□□□□ 0.97
CLCN1P35523 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.08■□□□□ 0.97
CLCN1P35523 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCN1P35523 PNMA6B-201ENST00000538162 1200 ntBASIC21.08■□□□□ 0.97
CLCN1P35523 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CLCN1P35523 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCN1P35523 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CLCN1P35523 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.08■□□□□ 0.96
CLCN1P35523 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.08■□□□□ 0.96
CLCN1P35523 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
CLCN1P35523 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.08■□□□□ 0.96
CLCN1P35523 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLCN1P35523 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.08■□□□□ 0.96
CLCN1P35523 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CLCN1P35523 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLCN1P35523 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms