Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC1P35251 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.55■□□□□ 0.72
RFC1P35251 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC1P35251 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.55■□□□□ 0.72
RFC1P35251 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.54■□□□□ 0.72
RFC1P35251 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 AC112777.1-201ENST00000540175 1423 ntBASIC19.54■□□□□ 0.72
RFC1P35251 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC1P35251 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RFC1P35251 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC1P35251 EGLN1P1-201ENST00000531623 762 ntBASIC19.54■□□□□ 0.72
RFC1P35251 BX088651.1-201ENST00000540551 451 ntBASIC19.54■□□□□ 0.72
RFC1P35251 MIR3180-5-201ENST00000583743 153 ntBASIC19.54■□□□□ 0.72
RFC1P35251 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.54■□□□□ 0.72
RFC1P35251 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RFC1P35251 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.54■□□□□ 0.72
RFC1P35251 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC1P35251 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC1P35251 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFC1P35251 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC1P35251 AC036111.1-201ENST00000533973 1582 ntBASIC19.53■□□□□ 0.72
RFC1P35251 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
RFC1P35251 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RFC1P35251 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RFC1P35251 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFC1P35251 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC1P35251 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 KRT18P41-201ENST00000518924 1277 ntBASIC19.53■□□□□ 0.72
RFC1P35251 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC1P35251 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC1P35251 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RFC1P35251 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RFC1P35251 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC1P35251 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RFC1P35251 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC1P35251 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFC1P35251 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RFC1P35251 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC1P35251 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.52■□□□□ 0.72
RFC1P35251 NAPSB-206ENST00000562112 1266 ntBASIC19.52■□□□□ 0.72
RFC1P35251 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFC1P35251 MYC-208ENST00000641036 567 ntBASIC19.52■□□□□ 0.72
RFC1P35251 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.52■□□□□ 0.72
RFC1P35251 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC1P35251 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC1P35251 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFC1P35251 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFC1P35251 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms