Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HOXC8P31273 SDHAP2-201ENST00000455183 2001 ntBASIC20.22■□□□□ 0.83
HOXC8P31273 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 AF238378.1-201ENST00000526806 358 ntBASIC20.22■□□□□ 0.83
HOXC8P31273 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC8P31273 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC8P31273 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 AC008687.5-201ENST00000593746 558 ntBASIC20.22■□□□□ 0.83
HOXC8P31273 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HOXC8P31273 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
HOXC8P31273 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
HOXC8P31273 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC8P31273 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
HOXC8P31273 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HOXC8P31273 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC8P31273 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HOXC8P31273 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC8P31273 TSPY12P-201ENST00000421279 868 ntBASIC20.21■□□□□ 0.83
HOXC8P31273 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC8P31273 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.21■□□□□ 0.83
HOXC8P31273 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
HOXC8P31273 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC8P31273 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HOXC8P31273 AL024508.2-201ENST00000607749 1894 ntBASIC20.21■□□□□ 0.83
HOXC8P31273 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.21■□□□□ 0.83
HOXC8P31273 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC8P31273 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.21■□□□□ 0.83
HOXC8P31273 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HOXC8P31273 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HOXC8P31273 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
HOXC8P31273 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXC8P31273 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXC8P31273 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 NUS1P2-201ENST00000417358 873 ntBASIC20.2■□□□□ 0.82
HOXC8P31273 RNA5SP419-201ENST00000515908 135 ntBASIC20.2■□□□□ 0.82
HOXC8P31273 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.2■□□□□ 0.82
HOXC8P31273 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.2■□□□□ 0.82
HOXC8P31273 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.2■□□□□ 0.82
HOXC8P31273 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.2■□□□□ 0.82
HOXC8P31273 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
HOXC8P31273 AC005332.7-201ENST00000614046 2005 ntBASIC20.2■□□□□ 0.82
HOXC8P31273 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 HLA-A-201ENST00000376802 1334 ntBASIC20.2■□□□□ 0.82
HOXC8P31273 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HOXC8P31273 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC8P31273 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
HOXC8P31273 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.19■□□□□ 0.82
HOXC8P31273 AC114341.1-201ENST00000618070 349 ntBASIC20.19■□□□□ 0.82
HOXC8P31273 TP73-AS1-207ENST00000624167 988 ntBASIC20.19■□□□□ 0.82
HOXC8P31273 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
HOXC8P31273 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HOXC8P31273 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXC8P31273 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXC8P31273 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HOXC8P31273 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HOXC8P31273 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms