Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC099343.3-201ENST00000605834 2503 ntBASIC17.26■□□□□ 0.35
TNFRSF1BP20333 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TNFRSF1BP20333 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 HTR7P1-201ENST00000538670 1336 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 AC093677.2-201ENST00000600169 1863 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 AP002982.1-201ENST00000492365 877 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 KRT18P6-201ENST00000555540 1265 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 RN7SL471P-201ENST00000580476 299 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 AC073648.6-201ENST00000641589 218 ntBASIC17.25■□□□□ 0.35
TNFRSF1BP20333 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF1BP20333 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 KRT8P45-201ENST00000414328 1447 ntBASIC17.24■□□□□ 0.35
TNFRSF1BP20333 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ID1-201ENST00000376105 1233 ntBASIC17.24■□□□□ 0.35
TNFRSF1BP20333 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.24■□□□□ 0.35
TNFRSF1BP20333 AC133681.1-201ENST00000465482 601 ntBASIC17.24■□□□□ 0.35
TNFRSF1BP20333 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF1BP20333 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 AC112777.1-201ENST00000540175 1423 ntBASIC17.23■□□□□ 0.35
TNFRSF1BP20333 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNFRSF1BP20333 REXO1L9P-201ENST00000604264 2108 ntBASIC17.23■□□□□ 0.35
TNFRSF1BP20333 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms