Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPA1P20036 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HLA-DPA1P20036 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 KRT18P23-201ENST00000435622 1283 ntBASIC18.7■□□□□ 0.58
HLA-DPA1P20036 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 KRT8P50-201ENST00000562022 1438 ntBASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DPA1P20036 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPA1P20036 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms