Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL6A2P12110 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL6A2P12110 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.34■□□□□ 0.53
COL6A2P12110 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL6A2P12110 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.34■□□□□ 0.53
COL6A2P12110 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.34■□□□□ 0.53
COL6A2P12110 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.34■□□□□ 0.53
COL6A2P12110 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.34■□□□□ 0.53
COL6A2P12110 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL6A2P12110 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.34■□□□□ 0.53
COL6A2P12110 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A2P12110 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.33■□□□□ 0.53
COL6A2P12110 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
COL6A2P12110 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COL6A2P12110 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL6A2P12110 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
COL6A2P12110 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.33■□□□□ 0.52
COL6A2P12110 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.33■□□□□ 0.52
COL6A2P12110 RPPH1-201ENST00000516869 333 ntBASIC18.33■□□□□ 0.52
COL6A2P12110 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.33■□□□□ 0.52
COL6A2P12110 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL6A2P12110 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
COL6A2P12110 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.32■□□□□ 0.52
COL6A2P12110 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL6A2P12110 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.32■□□□□ 0.52
COL6A2P12110 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
COL6A2P12110 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.32■□□□□ 0.52
COL6A2P12110 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.32■□□□□ 0.52
COL6A2P12110 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.32■□□□□ 0.52
COL6A2P12110 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.32■□□□□ 0.52
COL6A2P12110 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.32■□□□□ 0.52
COL6A2P12110 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 ESPNP-201ENST00000270691 2015 ntBASIC18.32■□□□□ 0.52
COL6A2P12110 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL6A2P12110 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.31■□□□□ 0.52
COL6A2P12110 MESTP1-201ENST00000404287 994 ntBASIC18.31■□□□□ 0.52
COL6A2P12110 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.31■□□□□ 0.52
COL6A2P12110 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.31■□□□□ 0.52
COL6A2P12110 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 AC008622.2-201ENST00000617006 1229 ntBASIC18.31■□□□□ 0.52
COL6A2P12110 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COL6A2P12110 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.31■□□□□ 0.52
COL6A2P12110 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.31■□□□□ 0.52
COL6A2P12110 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 AC096733.2-201ENST00000609937 1394 ntBASIC18.3■□□□□ 0.52
COL6A2P12110 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
COL6A2P12110 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.3■□□□□ 0.52
COL6A2P12110 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL6A2P12110 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.3■□□□□ 0.52
COL6A2P12110 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms