Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CAPNS1P04632 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPNS1P04632 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPNS1P04632 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CAPNS1P04632 AC093525.10-201ENST00000625130 1569 ntBASIC18.46■□□□□ 0.55
CAPNS1P04632 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CAPNS1P04632 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CAPNS1P04632 AC068880.1-201ENST00000507289 2297 ntBASIC18.46■□□□□ 0.54
CAPNS1P04632 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPNS1P04632 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.45■□□□□ 0.54
CAPNS1P04632 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.45■□□□□ 0.54
CAPNS1P04632 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.45■□□□□ 0.54
CAPNS1P04632 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.45■□□□□ 0.54
CAPNS1P04632 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.45■□□□□ 0.54
CAPNS1P04632 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CAPNS1P04632 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CAPNS1P04632 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.45■□□□□ 0.54
CAPNS1P04632 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.45■□□□□ 0.54
CAPNS1P04632 LTB4R2-202ENST00000528054 3092 ntBASIC18.45■□□□□ 0.54
CAPNS1P04632 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CAPNS1P04632 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CAPNS1P04632 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 KRT8P20-201ENST00000423953 1409 ntBASIC18.44■□□□□ 0.54
CAPNS1P04632 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 STARP1-201ENST00000397973 869 ntBASIC18.44■□□□□ 0.54
CAPNS1P04632 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.44■□□□□ 0.54
CAPNS1P04632 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CAPNS1P04632 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CAPNS1P04632 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CAPNS1P04632 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.43■□□□□ 0.54
CAPNS1P04632 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.43■□□□□ 0.54
CAPNS1P04632 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.43■□□□□ 0.54
CAPNS1P04632 MIR3180-1-201ENST00000580374 94 ntBASIC18.43■□□□□ 0.54
CAPNS1P04632 MIR3180-3-201ENST00000584616 94 ntBASIC18.43■□□□□ 0.54
CAPNS1P04632 AC092329.2-201ENST00000598402 547 ntBASIC18.43■□□□□ 0.54
CAPNS1P04632 HLA-A-209ENST00000638375 975 ntBASIC18.43■□□□□ 0.54
CAPNS1P04632 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
CAPNS1P04632 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CAPNS1P04632 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CAPNS1P04632 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms