Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC3P02656 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.96□□□□□ -0.01
APOC3P02656 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC3P02656 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC3P02656 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
APOC3P02656 AC010525.1-201ENST00000585559 441 ntBASIC14.96□□□□□ -0.01
APOC3P02656 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
APOC3P02656 RARRES2P11-201ENST00000635158 484 ntBASIC14.96□□□□□ -0.01
APOC3P02656 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.96□□□□□ -0.01
APOC3P02656 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOC3P02656 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.96□□□□□ -0.02
APOC3P02656 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.96□□□□□ -0.02
APOC3P02656 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.96□□□□□ -0.02
APOC3P02656 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOC3P02656 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.95□□□□□ -0.02
APOC3P02656 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
APOC3P02656 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.95□□□□□ -0.02
APOC3P02656 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOC3P02656 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
APOC3P02656 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
APOC3P02656 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.94□□□□□ -0.02
APOC3P02656 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 KRT16P6-202ENST00000425692 1426 ntBASIC14.94□□□□□ -0.02
APOC3P02656 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.94□□□□□ -0.02
APOC3P02656 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC3P02656 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APOC3P02656 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOC3P02656 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.94□□□□□ -0.02
APOC3P02656 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOC3P02656 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.94□□□□□ -0.02
APOC3P02656 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOC3P02656 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
APOC3P02656 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms