Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC28A2O43868 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC28A2O43868 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC28A2O43868 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC28A2O43868 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SLC28A2O43868 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SLC28A2O43868 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC28A2O43868 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC28A2O43868 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC28A2O43868 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC28A2O43868 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 TSPY21P-201ENST00000433481 731 ntBASIC17.87■□□□□ 0.45
SLC28A2O43868 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 TSPY23P-201ENST00000440136 739 ntBASIC17.87■□□□□ 0.45
SLC28A2O43868 C1QL1P1-201ENST00000568105 661 ntBASIC17.87■□□□□ 0.45
SLC28A2O43868 AC111152.3-201ENST00000569699 673 ntBASIC17.87■□□□□ 0.45
SLC28A2O43868 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A2O43868 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC28A2O43868 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SLC28A2O43868 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SLC28A2O43868 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC28A2O43868 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 AC131212.4-201ENST00000623606 975 ntBASIC17.87■□□□□ 0.45
SLC28A2O43868 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A2O43868 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC28A2O43868 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC28A2O43868 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC28A2O43868 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 AL138781.2-201ENST00000617896 1843 ntBASIC17.86■□□□□ 0.45
SLC28A2O43868 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SLC28A2O43868 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A2O43868 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC28A2O43868 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 AC010653.2-201ENST00000623505 997 ntBASIC17.86■□□□□ 0.45
SLC28A2O43868 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A2O43868 KRT8P45-201ENST00000414328 1447 ntBASIC17.86■□□□□ 0.45
SLC28A2O43868 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SLC28A2O43868 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC28A2O43868 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SLC28A2O43868 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.86■□□□□ 0.45
SLC28A2O43868 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SLC28A2O43868 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SLC28A2O43868 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SLC28A2O43868 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC28A2O43868 SLC25A1P2-201ENST00000430693 912 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms