Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL645929.1-201ENST00000420084 975 ntBASIC18.72■□□□□ 0.59
SMAD6O43541 PVRIG2P-201ENST00000435460 978 ntBASIC18.72■□□□□ 0.59
SMAD6O43541 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.72■□□□□ 0.59
SMAD6O43541 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.72■□□□□ 0.59
SMAD6O43541 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD6O43541 AC018445.3-201ENST00000624177 1945 ntBASIC18.72■□□□□ 0.59
SMAD6O43541 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMAD6O43541 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.72■□□□□ 0.59
SMAD6O43541 MYLKP1-201ENST00000509077 1580 ntBASIC18.72■□□□□ 0.59
SMAD6O43541 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.72■□□□□ 0.59
SMAD6O43541 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMAD6O43541 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMAD6O43541 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.71■□□□□ 0.59
SMAD6O43541 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.71■□□□□ 0.59
SMAD6O43541 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.71■□□□□ 0.59
SMAD6O43541 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMAD6O43541 AC112777.1-201ENST00000540175 1423 ntBASIC18.71■□□□□ 0.59
SMAD6O43541 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.71■□□□□ 0.59
SMAD6O43541 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMAD6O43541 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD6O43541 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD6O43541 MIR662-201ENST00000384847 95 ntBASIC18.7■□□□□ 0.58
SMAD6O43541 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.7■□□□□ 0.58
SMAD6O43541 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.7■□□□□ 0.58
SMAD6O43541 AL162741.1-201ENST00000565563 1558 ntBASIC18.7■□□□□ 0.58
SMAD6O43541 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD6O43541 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD6O43541 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD6O43541 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SMAD6O43541 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.7■□□□□ 0.58
SMAD6O43541 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMAD6O43541 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.69■□□□□ 0.58
SMAD6O43541 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.69■□□□□ 0.58
SMAD6O43541 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SMAD6O43541 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
SMAD6O43541 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMAD6O43541 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMAD6O43541 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMAD6O43541 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD6O43541 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.68■□□□□ 0.58
SMAD6O43541 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.68■□□□□ 0.58
SMAD6O43541 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMAD6O43541 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.68■□□□□ 0.58
SMAD6O43541 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.68■□□□□ 0.58
SMAD6O43541 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms