Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDN4O14493 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN4O14493 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 RNF152P1-201ENST00000397754 604 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 AK4P3-201ENST00000418260 669 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN4O14493 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.48■□□□□ 0.39
CLDN4O14493 KRT18P41-201ENST00000518924 1277 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 AC009065.1-201ENST00000564055 1225 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 AC139887.4-201ENST00000607877 719 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN4O14493 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 AC087289.5-201ENST00000586076 3175 ntBASIC17.48■□□□□ 0.39
CLDN4O14493 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN4O14493 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN4O14493 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN4O14493 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN4O14493 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 YBX1P2-201ENST00000489612 999 ntBASIC17.47■□□□□ 0.39
CLDN4O14493 LINC01238-205ENST00000567549 1107 ntBASIC17.47■□□□□ 0.39
CLDN4O14493 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 AC024243.1-201ENST00000609234 778 ntBASIC17.47■□□□□ 0.39
CLDN4O14493 AL023973.1-201ENST00000624619 620 ntBASIC17.47■□□□□ 0.39
CLDN4O14493 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDN4O14493 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN4O14493 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN4O14493 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN4O14493 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 ANO7L1-203ENST00000602586 1720 ntBASIC17.47■□□□□ 0.39
CLDN4O14493 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN4O14493 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN4O14493 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLDN4O14493 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 AL031598.1-201ENST00000561511 1773 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 AC117947.1-201ENST00000427448 529 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN4O14493 AC034232.1-201ENST00000506026 1064 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 AC104390.1-201ENST00000555663 520 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN4O14493 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN4O14493 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 TNXA-203ENST00000507684 2038 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 CROCCP3-202ENST00000420820 1947 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN4O14493 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.46■□□□□ 0.39
CLDN4O14493 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
CLDN4O14493 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN4O14493 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN4O14493 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN4O14493 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CLDN4O14493 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLDN4O14493 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLDN4O14493 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms