Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
AP3B1O00203 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
AP3B1O00203 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3B1O00203 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
AP3B1O00203 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3B1O00203 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
AP3B1O00203 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.75■□□□□ 0.59
AP3B1O00203 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.75■□□□□ 0.59
AP3B1O00203 AP006294.2-201ENST00000641667 209 ntBASIC18.75■□□□□ 0.59
AP3B1O00203 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.75■□□□□ 0.59
AP3B1O00203 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
AP3B1O00203 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.75■□□□□ 0.59
AP3B1O00203 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
AP3B1O00203 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
AP3B1O00203 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3B1O00203 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
AP3B1O00203 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3B1O00203 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 CCR12P-201ENST00000446203 998 ntBASIC18.74■□□□□ 0.59
AP3B1O00203 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.74■□□□□ 0.59
AP3B1O00203 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.74■□□□□ 0.59
AP3B1O00203 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.74■□□□□ 0.59
AP3B1O00203 Z99916.2-201ENST00000604037 246 ntBASIC18.74■□□□□ 0.59
AP3B1O00203 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
AP3B1O00203 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
AP3B1O00203 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3B1O00203 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
AP3B1O00203 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3B1O00203 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3B1O00203 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3B1O00203 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3B1O00203 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
AP3B1O00203 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3B1O00203 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
AP3B1O00203 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
AP3B1O00203 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3B1O00203 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms