Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.32□□□□□ -0.76
CHKB-CPT1BH3BT56 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 AC009831.1-201ENST00000580420 1582 ntBASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AC011676.5-201ENST00000624864 2660 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 HES4-202ENST00000428771 1040 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 CEP120-209ENST00000515110 606 ntTSL 3 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AC120024.1-201ENST00000562672 995 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 THA1P-201ENST00000590384 1145 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 NKILA-202ENST00000614771 2598 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 AC023824.1-201ENST00000562945 2975 ntBASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CHKB-CPT1BH3BT56 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms