Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC104076.2-201ENST00000448912 469 ntBASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC010653.2-201ENST00000623505 997 ntBASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC007663.1-201ENST00000438948 1240 ntBASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC083906.6-201ENST00000641366 219 ntBASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LETM1P2-201ENST00000597330 2178 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AK4P3-201ENST00000418260 669 ntBASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TCRBV4S1A1TA0A5B7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms