Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 AC026271.2-201ENST00000428091 497 ntBASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 AL162430.1-201ENST00000480705 870 ntBASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV27A0A0K0K1C4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 NBPF21P-201ENST00000425093 1451 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 Z85996.1-201ENST00000494644 937 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 AC083906.2-201ENST00000511578 360 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 KRT18P41-201ENST00000518924 1277 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 KRT8P11-201ENST00000409686 1436 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 HTR7P1-201ENST00000538670 1336 ntBASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV27A0A0K0K1C4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 SLC29A4P1-201ENST00000398760 971 ntBASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV27A0A0K0K1C4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms