Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV30A0A087WSZ9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 AC128676.1-201ENST00000454392 318 ntBASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 AC011298.2-201ENST00000617989 482 ntBASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 AL390961.4-201ENST00000623958 2535 ntBASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 BICD1-207ENST00000551848 1962 ntBASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV30A0A087WSZ9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AL135905.2-201ENST00000584934 1404 ntBASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 FAM207BP-201ENST00000447172 505 ntBASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 CD99P1-205ENST00000527459 561 ntBASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 CR392000.1-201ENST00000624770 1228 ntBASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV30A0A087WSZ9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms