Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 BX323043.1-201ENST00000641006 1765 ntBASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB9Q9Y5E1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 AL357033.4-201ENST00000617703 1807 ntBASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB9Q9Y5E1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 AL136038.3-201ENST00000561909 1096 ntBASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB9Q9Y5E1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDHB9Q9Y5E1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 MIR564-202ENST00000385049 94 ntBASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDHB9Q9Y5E1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHB9Q9Y5E1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms