Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
AP4S1Q9Y587 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 AC112777.1-201ENST00000540175 1423 ntBASIC17.56■□□□□ 0.4
AP4S1Q9Y587 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 AL512625.2-201ENST00000417533 625 ntBASIC17.56■□□□□ 0.4
AP4S1Q9Y587 TSPY23P-201ENST00000440136 739 ntBASIC17.56■□□□□ 0.4
AP4S1Q9Y587 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AP4S1Q9Y587 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 FLJ13224-201ENST00000313737 1514 ntBASIC17.55■□□□□ 0.4
AP4S1Q9Y587 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP4S1Q9Y587 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AD000864.1-201ENST00000624076 2295 ntBASIC17.54■□□□□ 0.4
AP4S1Q9Y587 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AC137761.2-201ENST00000561729 223 ntBASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AC145350.3-201ENST00000569033 163 ntBASIC17.54■□□□□ 0.4
AP4S1Q9Y587 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AC068587.9-201ENST00000641814 219 ntBASIC17.54■□□□□ 0.4
AP4S1Q9Y587 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP4S1Q9Y587 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms