Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC3Q9UQE7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMC3Q9UQE7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC3Q9UQE7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SMC3Q9UQE7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.84■■□□□ 1.09
SMC3Q9UQE7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 AC011506.1-201ENST00000474329 610 ntBASIC21.83■■□□□ 1.09
SMC3Q9UQE7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 MIR4651-201ENST00000582622 73 ntBASIC21.83■■□□□ 1.09
SMC3Q9UQE7 AC073195.1-201ENST00000607241 877 ntBASIC21.83■■□□□ 1.09
SMC3Q9UQE7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMC3Q9UQE7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMC3Q9UQE7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMC3Q9UQE7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 CD99P1-205ENST00000527459 561 ntBASIC21.81■■□□□ 1.08
SMC3Q9UQE7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 RARRES2P10-201ENST00000564312 460 ntBASIC21.81■■□□□ 1.08
SMC3Q9UQE7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 MIR6786-201ENST00000616843 113 ntBASIC21.81■■□□□ 1.08
SMC3Q9UQE7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMC3Q9UQE7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 B3GAT3P1-201ENST00000471720 806 ntBASIC21.8■■□□□ 1.08
SMC3Q9UQE7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMC3Q9UQE7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms