Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.73■□□□□ 0.11
RAB1BQ9H0U4 AC007952.6-201ENST00000573168 2673 ntBASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 AC003957.1-201ENST00000625108 2673 ntBASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 SPDYE13P-201ENST00000445314 798 ntBASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 HEIH-201ENST00000623091 1652 ntBASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RAB1BQ9H0U4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 KRT18P48-201ENST00000434763 852 ntBASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 AC079602.3-201ENST00000623931 403 ntBASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1BQ9H0U4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1BQ9H0U4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1BQ9H0U4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.71■□□□□ 0.1
RAB1BQ9H0U4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1BQ9H0U4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 AL162741.1-201ENST00000565563 1558 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 MIR662-201ENST00000384847 95 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 AP000593.1-201ENST00000393668 712 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 ATP5G2P1-201ENST00000433580 426 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 PVRIG2P-201ENST00000435460 978 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 Z98044.1-201ENST00000632503 1764 ntBASIC15.7■□□□□ 0.1
RAB1BQ9H0U4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1BQ9H0U4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms