Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLPBQ9H078 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.67■□□□□ 0.58
CLPBQ9H078 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.67■□□□□ 0.58
CLPBQ9H078 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.67■□□□□ 0.58
CLPBQ9H078 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.67■□□□□ 0.58
CLPBQ9H078 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 AC093525.10-201ENST00000625130 1569 ntBASIC18.67■□□□□ 0.58
CLPBQ9H078 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.67■□□□□ 0.58
CLPBQ9H078 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.67■□□□□ 0.58
CLPBQ9H078 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPBQ9H078 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLPBQ9H078 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 AL512353.2-201ENST00000448759 1962 ntBASIC18.66■□□□□ 0.58
CLPBQ9H078 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 AC092647.4-201ENST00000457211 535 ntBASIC18.66■□□□□ 0.58
CLPBQ9H078 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.66■□□□□ 0.58
CLPBQ9H078 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.66■□□□□ 0.58
CLPBQ9H078 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.66■□□□□ 0.58
CLPBQ9H078 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPBQ9H078 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.66■□□□□ 0.58
CLPBQ9H078 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
CLPBQ9H078 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLPBQ9H078 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLPBQ9H078 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CLPBQ9H078 Z98044.1-201ENST00000632503 1764 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CLPBQ9H078 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.65■□□□□ 0.58
CLPBQ9H078 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.65■□□□□ 0.58
CLPBQ9H078 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.65■□□□□ 0.58
CLPBQ9H078 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.65■□□□□ 0.58
CLPBQ9H078 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 MIR4674-201ENST00000582457 87 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 AC140113.3-201ENST00000605663 199 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 AL358472.4-201ENST00000633140 710 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 AL031432.5-201ENST00000641059 760 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 HEIH-201ENST00000623091 1652 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CLPBQ9H078 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CLPBQ9H078 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLPBQ9H078 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.65■□□□□ 0.58
CLPBQ9H078 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CLPBQ9H078 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPBQ9H078 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
CLPBQ9H078 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLPBQ9H078 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CLPBQ9H078 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLPBQ9H078 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLPBQ9H078 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms