Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HDHD3Q9BSH5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 KRT8P3-201ENST00000519669 1449 ntBASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AC004980.1-204ENST00000429707 299 ntBASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 AL445675.2-201ENST00000620291 557 ntBASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HDHD3Q9BSH5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 AC124016.1-201ENST00000609552 612 ntBASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 AC131212.4-201ENST00000623606 975 ntBASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HDHD3Q9BSH5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HDHD3Q9BSH5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms